BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A10SP1|AL430476
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1435 1794 0.0
>3x_Contig1435
Length = 8899
Score = 1794 bits (900), Expect = 0.0
Identities = 918/928 (98%), Gaps = 1/928 (0%)
Strand = Plus / Minus
Query: 1 gatcgaagtcgctggtggtaagaaagctttggctgtctttgttccagtcccatctttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5535 gatcgaagtcgctggtggtaagaaagctttggctgtctttgttccagtcccatctttggc 5476
Query: 61 tgcctaccacaaggtccaaatcaagttgaccagagaattggaaaagaagttccaagaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5475 tgcctaccacaaggtccaaatcaagttgaccagagaattggaaaagaagttccaagaccg 5416
Query: 121 tcatgtcatcttcttggctgaaagaagaatcttgccaaagccatctagaaaatccagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5415 tcatgtcatcttcttggctgaaagaagaatcttgccaaagccatctagaaaatccagaca 5356
Query: 181 aactcaaaagagaccaagatccagaaccttgactgctgttcacgataagatcttggaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5355 aactcaaaagagaccaagatccagaaccttgactgctgttcacgataagatcttggaaga 5296
Query: 241 tttggttttcccaactgawatcgttggtaagagagttagatacttggttggtggtaacaa 300
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5295 tttggttttcccaactgaaatcgttggtaagagagtcagatacttggttggtggtaacaa 5236
Query: 301 gatccaaaagatcttgttgaactccaaggacgtccaacacatcgacaacaagttggaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5235 gatccaaaagatcttgttgaactccaaggacgtccaacacatcgacaacaagttggaatc 5176
Query: 361 tttccaagccgtctacaacaaattgaccggtaagcaaattgttttcgaaatcccaagcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5175 tttccaagccgtctacaacaaattgaccggtaagcaaattgttttcgaaatcccaagcga 5116
Query: 421 aacccactaaatcagttgatagtttattttgtcaatwatcatctattaatctaaaagawa 480
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 5115 aacccactaaatcagttgatagtttattttgtcaataatcatctattaatctaaaagaaa 5056
Query: 481 tttaagttttattttcataaactcgtacttctggtactgtttctattgtattctagtgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 tttaagttttattttcataaactcgtacttctggtactgtttctattgtattctagtgtg 4996
Query: 541 agttctactcatttgagcttgawatgataatcttatatwawcaaatatwagctcttggca 600
|||||||||||||||||||||| ||||||||||||||| | ||||||| |||||||||||
Sbjct: 4995 agttctactcatttgagcttgaaatgataatcttatataaacaaatataagctcttggca 4936
Query: 601 catattatatcattctctacaagatcactaaagtacatgtttcattacggcgtaaatata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4935 catattatatcattctctacaagatcactaaagtacatgtttcattacggcgtaaatata 4876
Query: 661 gctagaaaccaccattgattaggatcaawaccaaccaaccaaccacacccattagtgtca 720
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4875 gctagaaaccaccattgattaggatcaaaaccaaccaaccaaccacacccattagtgtca 4816
Query: 721 attggtcgtaatgtgtgggtagatgtatataggagaaatcattcggcccttttaataaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4815 attggtcgtaatgtgtgggtagatgtatataggagaaatcattcggcccttttaataaaa 4756
Query: 781 gtttcgtaagctgcactcgttacagtaacaggttctggagcctgggtgggacggctgtgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4755 gtttcgtaagctgcactcgttacagtaacaggttctggagcctgggtgggacggctgtgt 4696
Query: 841 ttattaaccttagtttgcaaggtatttattcctattggttg-aaatcaccttcatgatgc 899
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4695 ttattaaccttagtttgcaaggtatttattcctattggttgaaaatcaccttcatgatgc 4636
Query: 900 ttactttgtcgagctttagtaggttgtt 927
||||||||||||||||||||||||||||
Sbjct: 4635 ttactttgtcgagctttagtaggttgtt 4608
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6833
Number of Sequences: 1807
Number of extensions: 6833
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)